home > sra-sample > ERS4424001
identifier ERS4424001
type sra-sample
sameAs
biosample  SAMEA6674463
organism human gut metagenome
attributes
ENA first public  2020-04-14
ENA last update  2020-04-13
External Id  SAMEA6674463
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2020-04-14T16:28:06Z
INSDC last update  2020-04-13T20:26:15Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000035779
acid_reflux  Unspecified
acne medication  No
acne_medication_otc  No
add_adhd  I do not have this condition
age cat  60s
age years  62
age_corrected  62
alcohol consumption  Yes
alcohol_frequency  Rarely (a few times/month)
antibiotic_history  6 months
appendix_removed  No
artificial_sweeteners  Unspecified
asd  I do not have this condition
autoimmune  I do not have this condition
birth year  1955
bmi  20.6
bmi_cat  Normal
bmi_corrected  20.6
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  Five or more
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  No
cancer  Unspecified
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  Yes
cdiff  I do not have this condition
census_region  Northeast
chickenpox  Yes
clinical condition  I do not have this condition
collection month  August
collection season  Summer
collection time  08:00
collection_date_only  2018-08-28
collection_timestamp  08/28/2018 08:00
consume_animal_products_abx  Yes
contraceptive  No
cosmetics_frequency  Regularly (3-5 times/week)
country  USA
country of birth  United States
country_residence  Unspecified
csection  No
deodorant_use  I use an antiperspirant
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dog  No
dominant hand  I am right handed
drinking_water_source  Well
drinks_per_session  Unspecified
economic_region  New England
elevation  7.9
env package  human-gut
env_material  feces
exercise_frequency  Occasionally (1-2 times/week)
exercise_location  Indoors
fed_as_infant  A mixture of breast milk and formula
fermented_plant_frequency  Never
flossing_frequency  Daily
flu_vaccine_date  Year
frozen_dessert_frequency  Rarely (less than once/week)
fruit_frequency  Rarely (less than once/week)
fungal_overgrowth  I do not have this condition
geo loc name  USA:MA
gluten  No
height cm  162
high_fat_red_meat_frequency  Never
homecooked_meals_frequency  Regularly (3-5 times/week)
host subject id  061f06c51ee015c2669699e624b5388549c7a68b9183c5d75ef1ee694bc39c1a6c66f27b4fca9c8b2ce9a70cdd3c320b4c02bf893da3dbf08478e3b80fc0f433
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  I do not have this condition
kidney_disease  Diagnosed by a medical professional (doctor, physician assistant)
lactose  No
last_move  I have lived in my current state of residence for more than a year.
last_travel  6 months
latitude  42.7
level_of_education  Graduate or Professional degree
liver_disease  I do not have this condition
livingwith  No
longitude  -70.8
lung disease  I do not have this condition
meat_eggs_frequency  Daily
mental_illness  Unspecified
mental_illness_type_anorexia_nervosa  Unspecified
mental_illness_type_bipolar_disorder  Unspecified
mental_illness_type_bulimia_nervosa  Unspecified
mental_illness_type_depression  Unspecified
mental_illness_type_ptsd_posttraumatic_stress_disorder  Unspecified
mental_illness_type_substance_abuse  Unspecified
mental_illness_type_unspecified  Unspecified
migraine  Diagnosed by a medical professional (doctor, physician assistant)
milk_cheese_frequency  Daily
milk_substitute_frequency  Never
multivitamin  No
nail_biter  No
olive_oil  Regularly (3-5 times/week)
one_liter_of_water_a_day_frequency  Daily
other_supplement_frequency  No
pets_other  Unspecified
pool_frequency  Never
poultry_frequency  Regularly (3-5 times/week)
pregnant  No
prepared_meals_frequency  Occasionally (1-2 times/week)
probiotic_frequency  Never
race  Caucasian
ready_to_eat_meals_frequency  Rarely (less than once/week)
red_meat_frequency  Rarely (less than once/week)
roommates_in_study  Unspecified
salted_snacks_frequency  Occasionally (1-2 times/week)
sample name  qiita_sid_10317:10317.000035779
sample type  Stool
seafood_frequency  Occasionally (1-2 times/week)
seasonal_allergies  No
sex  female
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  6-7 hours
smoking_frequency  Never
softener  No
specialized_diet_exclude_dairy  Unspecified
specialized_diet_exclude_refined_sugars  Unspecified
specialized_diet_fodmap  Unspecified
specialized_diet_i_do_not_eat_a_specialized_diet  Unspecified
specialized_diet_kosher  Unspecified
specialized_diet_modified_paleo_diet  Unspecified
specialized_diet_other_restrictions_not_described_here  Unspecified
specialized_diet_paleodiet_or_primal_diet  Unspecified
specialized_diet_raw_food_diet  Unspecified
specialized_diet_unspecified  Unspecified
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  Unspecified
state  MA
subset_age  true
subset_antibiotic_history  false
subset_bmi  true
subset_diabetes  true
subset_healthy  false
subset_ibd  true
sugar_sweetened_drink_frequency  Never
sugary_sweets_frequency  Occasionally (1-2 times/week)
survey_id  4565188333b5ac62
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  Unspecified
types_of_plants  Unspecified
vegetable_frequency  Daily
vitamin_b_supplement_frequency  Never
vitamin_d_supplement_frequency  Regularly (3-5 times/week)
vivid_dreams  Unspecified
weight kg  54
weight_change  Remained stable
whole_eggs  Daily
whole_grain_frequency  Rarely (less than once/week)
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR4019359ERR5532525
sra-submission  ERA2421689ERA3690463
biosample  SAMEA6674463
sra-study  ERP012803
sra-experiment  ERX4020747ERX5312932
distribution JSONJSON-LD
Download
ERA3690463.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2020-04-18T18:52:31Z
dateModified 2021-09-29T04:20:44Z
datePublished 2020-04-19T01:07:43Z