home > sra-sample > ERS4424002
identifier ERS4424002
type sra-sample
sameAs
biosample  SAMEA6674464
organism human gut metagenome
attributes
ENA first public  2020-04-14
ENA last update  2020-04-13
External Id  SAMEA6674464
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2020-04-14T16:28:06Z
INSDC last update  2020-04-13T20:26:15Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000038073
acid_reflux  I do not have this condition
acne medication  No
acne_medication_otc  Yes
add_adhd  I do not have this condition
age cat  20s
age years  29
age_corrected  29
alcohol consumption  Yes
alcohol_frequency  Rarely (a few times/month)
antibiotic_history  I have not taken antibiotics in the past year.
appendix_removed  Yes
artificial_sweeteners  Never
asd  I do not have this condition
autoimmune  I do not have this condition
birth year  1988
bmi  22.27
bmi_cat  Normal
bmi_corrected  22.27
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  Two
bowel_movement_quality  I tend to have diarrhea (watery stool) - Type 5, 6 and 7
breastmilk_formula_ensure  No
cancer  I do not have this condition
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  No
cdiff  Unspecified
census_region  Unspecified
chickenpox  Yes
clinical condition  I do not have this condition
collection month  August
collection season  Summer
collection time  09:10
collection_date_only  2018-08-10
collection_timestamp  08/10/2018 09:10
consume_animal_products_abx  Not sure
contraceptive  Yes, I use a hormonal IUD (Mirena)
cosmetics_frequency  Daily
country  United Kingdom
country of birth  United Kingdom
country_residence  United Kingdom
csection  No
deodorant_use  I use an antiperspirant
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dog  No
dominant hand  I am right handed
drinking_water_source  City
drinks_per_session  2-Jan
economic_region  Unspecified
elevation  Unspecified
env package  human-gut
env_material  feces
exercise_frequency  Rarely (a few times/month)
exercise_location  Outdoors
fed_as_infant  Primarily breast milk
fermented_plant_frequency  Rarely (less than once/week)
flossing_frequency  Rarely (a few times/month)
flu_vaccine_date  Year
frozen_dessert_frequency  Rarely (less than once/week)
fruit_frequency  Occasionally (1-2 times/week)
fungal_overgrowth  Unspecified
geo loc name  United Kingdom:Unspecified
gluten  No
height cm  160
high_fat_red_meat_frequency  Rarely (less than once/week)
homecooked_meals_frequency  Unspecified
host subject id  f57fa0e6f5afa8c7c6c8e89d628e6aeffc2521e1b9442a46452f8f2368db92b10840d47a1c000c22e78f7ecec322aae573e967ee533b0aa469bb59e04af05929
ibd  Diagnosed by a medical professional (doctor, physician assistant)
ibd diagnosis  Crohn's disease
ibd_diagnosis_refined  Ileal Crohn's Disease
ibs  Self-diagnosed
kidney_disease  I do not have this condition
lactose  Yes
last_move  I have lived in my current state of residence for more than a year.
last_travel  3 months
latitude  Unspecified
level_of_education  Graduate or Professional degree
liver_disease  I do not have this condition
livingwith  No
longitude  Unspecified
lung disease  I do not have this condition
meat_eggs_frequency  Occasionally (1-2 times/week)
mental_illness  No
mental_illness_type_anorexia_nervosa  No
mental_illness_type_bipolar_disorder  No
mental_illness_type_bulimia_nervosa  No
mental_illness_type_depression  No
mental_illness_type_ptsd_posttraumatic_stress_disorder  No
mental_illness_type_substance_abuse  No
mental_illness_type_unspecified  Yes
migraine  I do not have this condition
milk_cheese_frequency  Never
milk_substitute_frequency  Daily
multivitamin  Yes
nail_biter  Yes
olive_oil  Regularly (3-5 times/week)
one_liter_of_water_a_day_frequency  Occasionally (1-2 times/week)
other_supplement_frequency  No
pets_other  No
pool_frequency  Never
poultry_frequency  Occasionally (1-2 times/week)
pregnant  No
prepared_meals_frequency  Occasionally (1-2 times/week)
probiotic_frequency  Never
race  Caucasian
ready_to_eat_meals_frequency  Rarely (less than once/week)
red_meat_frequency  Occasionally (1-2 times/week)
roommates  One
roommates_in_study  No
salted_snacks_frequency  Rarely (less than once/week)
sample name  qiita_sid_10317:10317.000038073
sample type  Stool
seafood_frequency  Regularly (3-5 times/week)
seasonal_allergies  Yes
sex  female
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  7-8 hours
smoking_frequency  Daily
softener  Yes
specialized_diet_exclude_dairy  Yes
specialized_diet_exclude_refined_sugars  No
specialized_diet_fodmap  No
specialized_diet_i_do_not_eat_a_specialized_diet  No
specialized_diet_kosher  No
specialized_diet_modified_paleo_diet  No
specialized_diet_other_restrictions_not_described_here  No
specialized_diet_paleodiet_or_primal_diet  No
specialized_diet_raw_food_diet  No
specialized_diet_unspecified  No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  No
state  Unspecified
subset_age  true
subset_antibiotic_history  true
subset_bmi  true
subset_diabetes  true
subset_healthy  false
subset_ibd  false
sugar_sweetened_drink_frequency  Rarely (less than once/week)
sugary_sweets_frequency  Rarely (less than once/week)
survey_id  3256341e292ac703
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  No
types_of_plants  21 to 30
vegetable_frequency  Regularly (3-5 times/week)
vitamin_b_supplement_frequency  Never
vitamin_d_supplement_frequency  Regularly (3-5 times/week)
vivid_dreams  Never
weight kg  57
weight_change  Remained stable
whole_eggs  Occasionally (1-2 times/week)
whole_grain_frequency  Occasionally (1-2 times/week)
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR4019360ERR5532526
sra-submission  ERA2421689ERA3690463
biosample  SAMEA6674464
sra-study  ERP012803
sra-experiment  ERX4020748ERX5312933
distribution JSONJSON-LD
Download
ERA3690463.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2020-04-18T18:52:32Z
dateModified 2021-09-29T04:20:44Z
datePublished 2020-04-19T01:07:43Z