home > sra-sample > ERS4424003
identifier ERS4424003
type sra-sample
sameAs
biosample  SAMEA6674465
organism human gut metagenome
attributes
ENA first public  2020-04-14
ENA last update  2020-04-13
External Id  SAMEA6674465
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2020-04-14T16:28:06Z
INSDC last update  2020-04-13T20:26:15Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000058515
acid_reflux  I do not have this condition
acne medication  No
acne_medication_otc  No
add_adhd  I do not have this condition
age cat  20s
age years  25
age_corrected  25
alcohol consumption  Yes
alcohol_frequency  Rarely (a few times/month)
antibiotic_history  I have not taken antibiotics in the past year.
appendix_removed  No
artificial_sweeteners  Never
asd  I do not have this condition
autoimmune  I do not have this condition
birth year  1993
bmi  23.63
bmi_cat  Normal
bmi_corrected  23.63
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  Unspecified
bowel_movement_quality  I tend to have diarrhea (watery stool) - Type 5, 6 and 7
breastmilk_formula_ensure  No
cancer  I do not have this condition
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  No
cdiff  I do not have this condition
census_region  Unspecified
chickenpox  No
clinical condition  I do not have this condition
collection month  September
collection season  Fall
collection time  18:45
collection_date_only  2018-09-06
collection_timestamp  09/06/2018 18:45
consume_animal_products_abx  Yes
contraceptive  No
cosmetics_frequency  Never
country  USA
country of birth  United States
country_residence  United States
csection  No
deodorant_use  I do not use deodorant or an antiperspirant
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dog  No
dominant hand  I am right handed
drinking_water_source  Filtered
drinks_per_session  2-Jan
economic_region  Unspecified
elevation  Unspecified
env package  human-gut
env_material  feces
exercise_frequency  Regularly (3-5 times/week)
exercise_location  Both
fed_as_infant  Primarily breast milk
fermented_plant_frequency  Rarely (less than once/week)
flossing_frequency  Rarely (a few times/month)
flu_vaccine_date  I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency  Rarely (less than once/week)
fruit_frequency  Never
fungal_overgrowth  Unspecified
geo loc name  USA:Unspecified
gluten  Unspecified
height cm  175
high_fat_red_meat_frequency  Occasionally (1-2 times/week)
homecooked_meals_frequency  Regularly (3-5 times/week)
host subject id  1c22dfd5571773226179fdcaad498aebcc2602a465192f66bf63b11f071c7bcea51f05e47457f56e102081eb2950fd0c34f2546c9dd2df3744db8456ad6f93bf
ibd  Unspecified
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  Diagnosed by a medical professional (doctor, physician assistant)
kidney_disease  I do not have this condition
lactose  Unspecified
last_move  I have lived in my current state of residence for more than a year.
last_travel  6 months
latitude  Unspecified
level_of_education  Bachelor's degree
liver_disease  I do not have this condition
livingwith  No
longitude  Unspecified
lung disease  I do not have this condition
meat_eggs_frequency  Regularly (3-5 times/week)
mental_illness  No
mental_illness_type_anorexia_nervosa  No
mental_illness_type_bipolar_disorder  No
mental_illness_type_bulimia_nervosa  No
mental_illness_type_depression  No
mental_illness_type_ptsd_posttraumatic_stress_disorder  No
mental_illness_type_substance_abuse  No
mental_illness_type_unspecified  Yes
migraine  I do not have this condition
milk_cheese_frequency  Regularly (3-5 times/week)
milk_substitute_frequency  Rarely (less than once/week)
multivitamin  Yes
nail_biter  Yes
olive_oil  Rarely (less than once/week)
one_liter_of_water_a_day_frequency  Daily
other_supplement_frequency  Yes
pets_other  No
pool_frequency  Rarely (a few times/month)
poultry_frequency  Rarely (less than once/week)
pregnant  No
prepared_meals_frequency  Occasionally (1-2 times/week)
probiotic_frequency  Regularly (3-5 times/week)
race  Caucasian
ready_to_eat_meals_frequency  Rarely (less than once/week)
red_meat_frequency  Regularly (3-5 times/week)
roommates  More than three
roommates_in_study  No
salted_snacks_frequency  Rarely (less than once/week)
sample name  qiita_sid_10317:10317.000058515
sample type  Stool
seafood_frequency  Rarely (less than once/week)
seasonal_allergies  No
sex  male
sibo  Unspecified
skin_condition  I do not have this condition
sleep_duration  7-8 hours
smoking_frequency  Never
softener  Yes
specialized_diet_exclude_dairy  No
specialized_diet_exclude_refined_sugars  No
specialized_diet_fodmap  No
specialized_diet_i_do_not_eat_a_specialized_diet  No
specialized_diet_kosher  No
specialized_diet_modified_paleo_diet  No
specialized_diet_other_restrictions_not_described_here  Yes
specialized_diet_paleodiet_or_primal_diet  No
specialized_diet_raw_food_diet  No
specialized_diet_unspecified  No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  No
state  Unspecified
subset_age  true
subset_antibiotic_history  true
subset_bmi  true
subset_diabetes  true
subset_healthy  false
subset_ibd  false
sugar_sweetened_drink_frequency  Rarely (less than once/week)
sugary_sweets_frequency  Occasionally (1-2 times/week)
survey_id  2f563c65c8d03411
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  No
types_of_plants  Less than 5
vegetable_frequency  Regularly (3-5 times/week)
vitamin_b_supplement_frequency  Never
vitamin_d_supplement_frequency  Rarely (a few times/month)
vivid_dreams  Rarely (a few times/month)
weight kg  72
weight_change  Remained stable
whole_eggs  Never
whole_grain_frequency  Rarely (less than once/week)
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR4019361
sra-submission  ERA2421689
biosample  SAMEA6674465
sra-study  ERP012803
sra-experiment  ERX4020749
distribution JSONJSON-LD
Download
ERA2421689.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2020-04-18T18:52:32Z
dateModified 2021-09-29T04:20:45Z
datePublished 2020-04-19T01:07:43Z