home > sra-sample > ERS4424006
identifier ERS4424006
type sra-sample
sameAs
biosample  SAMEA6674468
organism human gut metagenome
attributes
ENA first public  2020-04-14
ENA last update  2020-04-13
External Id  SAMEA6674468
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2020-04-14T16:28:06Z
INSDC last update  2020-04-13T20:26:15Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000068299
acid_reflux  Diagnosed by a medical professional (doctor, physician assistant)
acne medication  No
acne_medication_otc  No
add_adhd  I do not have this condition
age cat  50s
age years  55
age_corrected  55
alcohol consumption  Yes
alcohol_frequency  Regularly (3-5 times/week)
antibiotic_history  Year
appendix_removed  No
artificial_sweeteners  Rarely (a few times/month)
asd  I do not have this condition
autoimmune  I do not have this condition
birth year  1963
bmi  32.78
bmi_cat  Obese
bmi_corrected  32.78
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  One
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  No
cancer  Diagnosed by a medical professional (doctor, physician assistant)
cancer treatment  Surgery only
cardiovascular_disease  I do not have this condition
cat  No
cdiff  I do not have this condition
census_region  West
chickenpox  Yes
clinical condition  I do not have this condition
collection month  August
collection season  Summer
collection time  14:10
collection_date_only  2018-08-16
collection_timestamp  08/16/2018 14:10
consume_animal_products_abx  Not sure
contraceptive  No
cosmetics_frequency  Rarely (a few times/month)
country  USA
country of birth  United States
country_residence  United States
csection  Not sure
deodorant_use  Not sure, but I use some form of deodorant/antiperspirant
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dog  Yes
dominant hand  I am right handed
drinking_water_source  City
drinks_per_session  4-Mar
economic_region  Far West
elevation  99.6
env package  human-gut
env_material  feces
exercise_frequency  Regularly (3-5 times/week)
exercise_location  Indoors
fed_as_infant  Primarily infant formula
fermented_plant_frequency  Regularly (3-5 times/week)
flossing_frequency  Occasionally (1-2 times/week)
flu_vaccine_date  I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency  Occasionally (1-2 times/week)
fruit_frequency  Occasionally (1-2 times/week)
fungal_overgrowth  Diagnosed by an alternative medicine practitioner
geo loc name  USA:CA
gluten  I was diagnosed with gluten allergy (anti-gluten IgG), but not celiac disease
height cm  175
high_fat_red_meat_frequency  Occasionally (1-2 times/week)
homecooked_meals_frequency  Regularly (3-5 times/week)
host subject id  5ac10b90ed1413ca3e63d36cf22ca11a10347321279565fb0e4bdf8950231941dd15a5d310cf2c258da1f6948d7bcb114c0689ece917f29996de303244002eea
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  I do not have this condition
kidney_disease  I do not have this condition
lactose  No
last_move  I have lived in my current state of residence for more than a year.
last_travel  6 months
latitude  37.8
level_of_education  Graduate or Professional degree
liver_disease  I do not have this condition
livingwith  No
longitude  -122.4
lung disease  I do not have this condition
meat_eggs_frequency  Regularly (3-5 times/week)
mental_illness  No
mental_illness_type_anorexia_nervosa  No
mental_illness_type_bipolar_disorder  No
mental_illness_type_bulimia_nervosa  No
mental_illness_type_depression  No
mental_illness_type_ptsd_posttraumatic_stress_disorder  No
mental_illness_type_substance_abuse  No
mental_illness_type_unspecified  Yes
migraine  I do not have this condition
milk_cheese_frequency  Regularly (3-5 times/week)
milk_substitute_frequency  Regularly (3-5 times/week)
multivitamin  No
nail_biter  No
olive_oil  Regularly (3-5 times/week)
one_liter_of_water_a_day_frequency  Regularly (3-5 times/week)
other_supplement_frequency  Yes
pets_other  No
pool_frequency  Occasionally (1-2 times/week)
poultry_frequency  Regularly (3-5 times/week)
pregnant  No
prepared_meals_frequency  Regularly (3-5 times/week)
probiotic_frequency  Occasionally (1-2 times/week)
race  Caucasian
ready_to_eat_meals_frequency  Occasionally (1-2 times/week)
red_meat_frequency  Occasionally (1-2 times/week)
roommates_in_study  No
salted_snacks_frequency  Regularly (3-5 times/week)
sample name  qiita_sid_10317:10317.000068299
sample type  Stool
seafood_frequency  Occasionally (1-2 times/week)
seasonal_allergies  Yes
sex  female
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  7-8 hours
smoking_frequency  Never
softener  No
specialized_diet_exclude_dairy  No
specialized_diet_exclude_refined_sugars  No
specialized_diet_fodmap  No
specialized_diet_i_do_not_eat_a_specialized_diet  Yes
specialized_diet_kosher  No
specialized_diet_modified_paleo_diet  No
specialized_diet_other_restrictions_not_described_here  No
specialized_diet_paleodiet_or_primal_diet  No
specialized_diet_raw_food_diet  No
specialized_diet_unspecified  No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  No
state  CA
subset_age  true
subset_antibiotic_history  false
subset_bmi  false
subset_diabetes  true
subset_healthy  false
subset_ibd  true
sugar_sweetened_drink_frequency  Rarely (less than once/week)
sugary_sweets_frequency  Regularly (3-5 times/week)
survey_id  4df5383589307005
teethbrushing_frequency  Daily
thyroid  Diagnosed by a medical professional (doctor, physician assistant)
tonsils_removed  No
types_of_plants  11 to 20
vegetable_frequency  Occasionally (1-2 times/week)
vitamin_b_supplement_frequency  Occasionally (1-2 times/week)
vitamin_d_supplement_frequency  Rarely (a few times/month)
vivid_dreams  Rarely (a few times/month)
weight kg  100
weight_change  Increased more than 10 pounds
whole_eggs  Regularly (3-5 times/week)
whole_grain_frequency  Occasionally (1-2 times/week)
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR4019365ERR5532527
sra-submission  ERA2421689ERA3690463
biosample  SAMEA6674468
sra-study  ERP012803
sra-experiment  ERX4020753ERX5312934
distribution JSONJSON-LD
Download
ERA3690463.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2020-04-18T18:52:33Z
dateModified 2021-09-29T04:20:46Z
datePublished 2020-04-19T01:07:43Z