home > sra-sample > ERS514159
identifier ERS514159
type sra-sample
sameAs
biosample  SAMEA2673224
organism uncultured methanogenic archaeon
attributes
ENA first public  2014-09-27
ENA last update  2016-10-21
External Id  SAMEA2673224
INSDC center alias  VTT
INSDC center name  VTT Technical Research Centre of Finland
INSDC first public  2014-09-27T17:04:05Z
INSDC last update  2016-10-21T09:43:58Z
INSDC status  public
Submitter Id  OL-KR6M
adapters  CGTATCGCCTCCCTCGCGCCATCAG, CTATGCGCCTTGCCAGCCCGCTCAG
alkalinity  0.37
calcium  1100
chloride  6230
collection date  2010-05-18
conductivity  1832
environment (biome)  aquifer
environment (feature)  saline groundwater
environment (material)  water
geographic location (country and/or sea)  Finland
geographic location (depth)  328
geographic location (latitude)  61.23694444
geographic location (longitude)  21.44083333
geographic location (region and locality)  Olkiluoto
investigation type  metagenome
magnesium  0.003
multiplex identifiers  TCTATG
nucleic acid extraction  MoBio Power water RNA extraction kit
organism count  100000 /ml
oxygenation status of sample  anaerobic
pcr primers  GCMATGCARATHGGWATGTC, TGTGTGAAWCCKACDCCACC
ph  7.9
project name  DeepOlki
sample collection device or method  pumping
sample material processing  concentration by filtration
sample name  OL-KR6M
sample volume or weight for DNA extraction  1000
sequencing method  454 Titanium
source material identifiers  groundwater
water environmental package  water
properties 
{...}
dbXrefs
bioproject  PRJEB6874
sra-run  ERR571287
sra-submission  ERA337217
biosample  SAMEA2673224
sra-study  ERP006516
sra-experiment  ERX530276
distribution JSONJSON-LD
Download
ERA337217.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2014-09-28T11:00:32Z
dateModified 2021-09-10T16:16:46Z
datePublished 2014-09-28T11:00:32Z