home > sra-sample > ERS877199
identifier ERS877199
type sra-sample
sameAs
biosample  SAMEA3570050
organism human gut metagenome
attributes
ENA first public  2015-10-04
ENA last update  2018-03-09
External Id  SAMEA3570050
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2015-10-04T17:01:05Z
INSDC last update  2018-03-09T13:32:26Z
INSDC status  public
Submitter Id  qiime_ppdid_586:10288.000020602
acne medication  false
acne_medication_otc  false
add_adhd  I do not have this condition
age years  27
alcohol_frequency  Rarely (a few times/month)
alcohol_types_beer_cider  false
alcohol_types_red_wine  false
alcohol_types_sour_beers  false
alcohol_types_spirits_hard_alcohol  false
alcohol_types_unspecified  false
alcohol_types_white_wine  true
allergic to i have no food allergies that i know of  true
allergic_to_other  false
allergic_to_peanuts  false
allergic_to_shellfish  false
allergic_to_tree_nuts  false
allergic_to_unspecified  false
altitude  0
alzheimers  I do not have this condition
anonymized name  20602
antibiotic_condition  mistake; I took just one; didn_t affect me
antibiotic_med  nifuroxazide
antibiotic_select  6 months
appendix_removed  No
asd  Self-diagnosed
assigned_from_geo  true
autoimmune  I do not have this condition
birth year  1988
bmi  19.13580247
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  Two
bowel_movement_quality  I tend to have diarrhea (watery stool)
breastmilk_formula_ensure  No
cardiovascular_disease  I do not have this condition
cat  false
cdiff  I do not have this condition
chickenpox  Yes
clinical condition  I do not have this condition
collection date  6/9/15 0:00
collection_timestamp  6/9/15 0:00
common name  human gut metagenome
conditions_medication  false
consume_animal_products_abx  No
contraceptive  No
cosmetics_frequency  Never
country  Sweden
country of birth  Switzerland
csection  No
deodorant_use  I do not use deodorant or an antiperspirant
depression_bipolar_schizophrenia  Diagnosed by a medical professional (doctor, physician assistant)
depth  0
diabetes  I do not have this condition
diet type  Omnivore
diet_restrictions_list  I generally do not drink milk (different in the past).
dna_extracted  true
dog  false
drinking_water_source  City
elevation  18.1
env biome  ENVO:dense settlement biome
env feature  ENVO:human-associated habitat
env matter  ENVO:feces
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Occasionally (1-2 times/week)
exercise_location  Outdoors
fed_as_infant  Primarily breast milk
fermented_plant_frequency  Rarely (less than once/week)
flossing_frequency  Never
flu_vaccine_date  I have not gotten the flu vaccine in the past year.
frozen_desert_frequency  Never
fruit_frequency  Occasionally (1-2 times/week)
gluten  No
hand  I am left handed
has_physical_specimen  true
height cm  180
height or length  180
height_units  centimeters
high_fat_red_meat_frequency  Never
homecooked_meals_frequency  Daily
host subject id  31f22d21ef6f142dc4053335839f57bb
host taxid  9606
ibd  I do not have this condition
ibs  Diagnosed by a medical professional (doctor, physician assistant)
kidney_disease  I do not have this condition
lactose  true
last_move  I have lived in my current state of residence for more than a year.
last_travel  Month
latitude  59.3
level_of_education  Bachelor's degree
liver_disease  I do not have this condition
livingwith  Yes
longitude  18
lowgrain_diet_type  true
lung disease  I do not have this condition
meat_eggs_frequency  Occasionally (1-2 times/week)
migraine  I do not have this condition
milk_cheese_frequency  Never
milk_substitute_frequency  Never
multivitamin  false
nail  false
non_food_allergies_beestings  false
non_food_allergies_drug__e_g__penicillin_  false
non_food_allergies_pet_dander  false
non_food_allergies_poison_ivy_oak  false
non_food_allergies_sun  false
non_food_allergies_unspecified  true
olive_oil  Regularly (3-5 times/week)
one_liter_of_water_a_day_frequency  Daily
other_supplement_frequency  true
physical_sample_location  UCSDMI
physical_specimen_location  UCSDMI
physical_specimen_remaining  true
pku  I do not have this condition
pool_frequency  Never
poultry_frequency  Rarely (less than once/week)
pregnant  No
prepared_meals_frequency  Regularly (3-5 times/week)
probiotic_frequency  Regularly (3-5 times/week)
public  true
race  Caucasian
ready_to_eat_meals_frequency  Never
red_meat_frequency  Rarely (less than once/week)
relationships_with_others_in_study  partner
required_sample_info_status  completed
roommates  One
roommates_in_study  Yes
salted_snacks_frequency  Rarely (less than once/week)
sample name  qiime_ppdid_586:10288.000020602
sample type  Stool
seafood_frequency  Regularly (3-5 times/week)
seasonal_allergies  false
sex  male
skin_condition  Diagnosed by a medical professional (doctor, physician assistant)
sleep_duration  7-8 hours
smoking_frequency  Never
softener  false
special_restrictions  true
state  Stockholms län
sugar_sweetened_drink_frequency  Occasionally (1-2 times/week)
sugary_sweets_frequency  Never
supplements  omega-3 from phytoplancton
survey_id  0e07c3edb3ac30f5
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  Yes
tot_mass  62
travel_locations_list  Canada (cats there)
types_of_plants  Daily
vegetable_frequency  Never
vitamin_b_supplement_frequency  Regularly (3-5 times/week)
vitamin_d_supplement_frequency  Remained stable
weight_change  62
weight_units  kilograms
whole_eggs  Occasionally (1-2 times/week)
whole_grain_frequency  Occasionally (1-2 times/week)
willing_to_be_contacted  true
properties 
{...}
dbXrefs
bioproject  PRJEB11170
sra-run  ERR1039989
sra-submission  ERA500968
biosample  SAMEA3570050
sra-study  ERP012511
sra-experiment  ERX1119461
distribution JSONJSON-LD
Download
ERA500968.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2015-10-05T18:21:16Z
dateModified 2021-09-23T12:36:08Z
datePublished 2015-10-22T17:30:03Z