home > sra-sample > ERS877204
identifier ERS877204
type sra-sample
sameAs
biosample  SAMEA3570055
organism human gut metagenome
attributes
ENA first public  2015-10-04
ENA last update  2018-03-09
External Id  SAMEA3570055
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2015-10-04T17:01:06Z
INSDC last update  2018-03-09T13:32:34Z
INSDC status  public
Submitter Id  qiime_ppdid_586:10288.000020680
acne medication  false
acne_medication_otc  false
add_adhd  I do not have this condition
age years  29
alcohol_frequency  Rarely (a few times/month)
alcohol_types_beer_cider  false
alcohol_types_red_wine  false
alcohol_types_sour_beers  false
alcohol_types_spirits_hard_alcohol  true
alcohol_types_unspecified  false
alcohol_types_white_wine  false
allergic to i have no food allergies that i know of  true
allergic_to_other  false
allergic_to_peanuts  false
allergic_to_shellfish  false
allergic_to_tree_nuts  false
allergic_to_unspecified  false
altitude  0
alzheimers  I do not have this condition
anonymized name  20680
antibiotic_select  I have not taken antibiotics in the past year.
appendix_removed  No
asd  I do not have this condition
assigned_from_geo  true
autoimmune  I do not have this condition
birth year  1986
bmi  23.88844098
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  Four
bowel_movement_quality  I tend to have normal formed stool
breastmilk_formula_ensure  No
cardiovascular_disease  I do not have this condition
cat  false
cdiff  I do not have this condition
chickenpox  Yes
clinical condition  I do not have this condition
collection date  2/21/15 0:00
collection_timestamp  2/21/15 0:00
common name  human gut metagenome
conditions_medication  false
consume_animal_products_abx  Yes
contraceptive  No
cosmetics_frequency  Never
country  Norway
country of birth  Sweden
csection  No
deodorant_use  I use an antiperspirant
depression_bipolar_schizophrenia  I do not have this condition
depth  0
diabetes  I do not have this condition
diet type  Omnivore
diet_restrictions_list  No gluten (or rather - avoiding gliadin and lectins), also restricted intake of milk-protein, much __good__ fat
dna_extracted  true
dog  false
drinking_water_source  City
env biome  ENVO:dense settlement biome
env feature  ENVO:human-associated habitat
env matter  ENVO:feces
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Occasionally (1-2 times/week)
exercise_location  Both
fed_as_infant  A mixture of breast milk and formula
fermented_plant_frequency  Rarely (less than once/week)
flossing_frequency  Never
flu_vaccine_date  I have not gotten the flu vaccine in the past year.
frozen_desert_frequency  Never
fruit_frequency  Rarely (less than once/week)
fungal_overgrowth  I do not have this condition
gluten  I do not eat gluten because it makes me feel bad
hand  I am right handed
has_physical_specimen  true
height cm  183
height or length  183
height_units  centimeters
high_fat_red_meat_frequency  Occasionally (1-2 times/week)
homecooked_meals_frequency  Daily
host subject id  f7b52b0cdbac858cfbf3ffc424486059
host taxid  9606
ibd  I do not have this condition
ibs  I do not have this condition
kidney_disease  I do not have this condition
lactose  false
last_move  I have lived in my current state of residence for more than a year.
last_travel  3 months
level_of_education  Some graduate school or professional
liver_disease  I do not have this condition
livingwith  Yes
lowgrain_diet_type  true
lung disease  I do not have this condition
meat_eggs_frequency  Daily
migraine  Self-diagnosed
milk_cheese_frequency  Rarely (less than once/week)
milk_substitute_frequency  Never
multivitamin  true
nail  true
non_food_allergies_beestings  false
non_food_allergies_drug__e_g__penicillin_  false
non_food_allergies_pet_dander  true
non_food_allergies_poison_ivy_oak  false
non_food_allergies_sun  false
non_food_allergies_unspecified  false
olive_oil  Rarely (less than once/week)
one_liter_of_water_a_day_frequency  Daily
other_supplement_frequency  true
physical_sample_location  UCSDMI
physical_specimen_location  UCSDMI
physical_specimen_remaining  true
pku  I do not have this condition
pool_frequency  Rarely (a few times/month)
poultry_frequency  Regularly (3-5 times/week)
pregnant  No
prepared_meals_frequency  Rarely (less than once/week)
probiotic_frequency  Daily
public  true
race  Caucasian
ready_to_eat_meals_frequency  Never
red_meat_frequency  Rarely (less than once/week)
required_sample_info_status  completed
roommates  Three
roommates_in_study  No
salted_snacks_frequency  Never
sample name  qiime_ppdid_586:10288.000020680
sample type  Stool
seafood_frequency  Occasionally (1-2 times/week)
seasonal_allergies  true
sex  male
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  8 or more hours
smoking_frequency  Never
softener  true
special_restrictions  true
sugar_sweetened_drink_frequency  Never
sugary_sweets_frequency  Never
supplements  Powder; Hemp protein, Collagen, MSM, curcumin, L-glutamine. Pills (some daily, other at occasions); apple cider vinager, green tea, L-arganin, B12, magnesium, B vitamin complex, multivitamin, zink, liver pills, aloe vera, probiotics (2 or 3 different), kalium, selenium, C-vitamin, vitamine E. Fluids; MCT oil, coconut oil, butter, grassfed butter oil, fermented cod liver oil.
survey_id  c5dfb300b4dbf123
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  Yes
tot_mass  80
travel_locations_list  From Norway to Sweden. No longer travels outside northern europe.
types_of_plants  Regularly (3-5 times/week)
vegetable_frequency  Occasionally (1-2 times/week)
vitamin_b_supplement_frequency  Daily
vitamin_d_supplement_frequency  Remained stable
weight_change  80
weight_units  kilograms
whole_eggs  Daily
whole_grain_frequency  Never
willing_to_be_contacted  true
properties 
{...}
dbXrefs
bioproject  PRJEB11170
sra-run  ERR1039993
sra-submission  ERA500968
biosample  SAMEA3570055
sra-study  ERP012511
sra-experiment  ERX1119465
distribution JSONJSON-LD
Download
ERA500968.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2015-10-05T18:21:17Z
dateModified 2021-09-23T12:36:10Z
datePublished 2015-10-22T17:30:03Z