| ENA first public |
2015-10-04 |
| ENA last update |
2018-03-09 |
| External Id |
SAMEA3570148 |
| INSDC center alias |
UCSDMI |
| INSDC center name |
University of California San Diego Microbiome Initiative |
| INSDC first public |
2015-10-04T17:01:04Z |
| INSDC last update |
2018-03-09T13:31:42Z |
| INSDC status |
public |
| Submitter Id |
qiime_ppdid_586:10288.000026615 |
| acne medication |
false |
| acne_medication_otc |
false |
| add_adhd |
I do not have this condition |
| age years |
59 |
| alcohol_frequency |
Rarely (a few times/month) |
| alcohol_types_beer_cider |
false |
| alcohol_types_red_wine |
true |
| alcohol_types_sour_beers |
false |
| alcohol_types_spirits_hard_alcohol |
false |
| alcohol_types_unspecified |
false |
| alcohol_types_white_wine |
true |
| allergic to i have no food allergies that i know of |
false |
| allergic_to_other |
true |
| allergic_to_peanuts |
false |
| allergic_to_shellfish |
false |
| allergic_to_tree_nuts |
false |
| allergic_to_unspecified |
false |
| altitude |
0 |
| alzheimers |
I do not have this condition |
| anonymized name |
26615 |
| antibiotic_select |
I have not taken antibiotics in the past year. |
| appendix_removed |
No |
| assigned_from_geo |
true |
| autoimmune |
Self-diagnosed |
| birth year |
1956 |
| bmi |
34.75113918 |
| body habitat |
UBERON:feces |
| body product |
UBERON:feces |
| body site |
UBERON:feces |
| bowel_movement_frequency |
One |
| bowel_movement_quality |
I tend to have normal formed stool |
| breastmilk_formula_ensure |
No |
| cardiovascular_disease |
I do not have this condition |
| cat |
false |
| cdiff |
I do not have this condition |
| chickenpox |
Yes |
| clinical condition |
Diagnosed by a medical professional (doctor, physician assistant) |
| collection date |
5/5/15 0:00 |
| collection_timestamp |
5/5/15 0:00 |
| common name |
human gut metagenome |
| conditions_medication |
true |
| consume_animal_products_abx |
Yes |
| contraceptive |
No |
| cosmetics_frequency |
Regularly (3-5 times/week) |
| country |
USA |
| country of birth |
United States |
| csection |
No |
| deodorant_use |
I use an antiperspirant |
| depression_bipolar_schizophrenia |
I do not have this condition |
| depth |
0 |
| diabetes |
I do not have this condition |
| diet type |
Omnivore |
| dna_extracted |
true |
| dog |
false |
| drinking_water_source |
City |
| elevation |
57.1 |
| env biome |
ENVO:dense settlement biome |
| env feature |
ENVO:human-associated habitat |
| env matter |
ENVO:feces |
| epilepsy_or_seizure_disorder |
I do not have this condition |
| exercise_frequency |
Rarely (a few times/month) |
| exercise_location |
Depends on the season |
| fed_as_infant |
A mixture of breast milk and formula |
| fermented_plant_frequency |
Occasionally (1-2 times/week) |
| flossing_frequency |
Regularly (3-5 times/week) |
| flu_vaccine_date |
I have not gotten the flu vaccine in the past year. |
| frozen_desert_frequency |
Rarely (less than once/week) |
| fruit_frequency |
Occasionally (1-2 times/week) |
| fungal_overgrowth |
I do not have this condition |
| gluten |
I was diagnosed with gluten allergy (anti-gluten IgG), but not celiac disease |
| hand |
I am right handed |
| has_physical_specimen |
true |
| height cm |
157.48 |
| height or length |
157.48 |
| height_units |
centimeters |
| high_fat_red_meat_frequency |
Regularly (3-5 times/week) |
| homecooked_meals_frequency |
Regularly (3-5 times/week) |
| host subject id |
5367e288062e3a24e78090fab4411cca |
| host taxid |
9606 |
| ibd |
I do not have this condition |
| ibs |
I do not have this condition |
| kidney_disease |
I do not have this condition |
| lactose |
false |
| last_move |
I have lived in my current state of residence for more than a year. |
| last_travel |
I have not been outside of my country of residence in the past year. |
| latitude |
37.8 |
| level_of_education |
Some graduate school or professional |
| liver_disease |
I do not have this condition |
| livingwith |
No |
| longitude |
-122.4 |
| lowgrain_diet_type |
false |
| lung disease |
I do not have this condition |
| meat_eggs_frequency |
Regularly (3-5 times/week) |
| medication_list |
VALCYTE, FAMVIR, ZOLOFT, MOTRIN,FLONASE, CLARITIN, PLAQUENIL |
| migraine |
I do not have this condition |
| milk_cheese_frequency |
Daily |
| milk_substitute_frequency |
Rarely (less than once/week) |
| multivitamin |
false |
| nail |
false |
| non_food_allergies_beestings |
true |
| non_food_allergies_drug__e_g__penicillin_ |
true |
| non_food_allergies_pet_dander |
true |
| non_food_allergies_poison_ivy_oak |
true |
| non_food_allergies_sun |
false |
| non_food_allergies_unspecified |
false |
| olive_oil |
Regularly (3-5 times/week) |
| one_liter_of_water_a_day_frequency |
Daily |
| other_condtitions_list |
COMMIN VARIABLE IMMUNE DEFICIENCY, CHRONIC FATIGUE SYNDROME, SLEEP APNEA |
| other_supplement_frequency |
true |
| physical_sample_location |
UCSDMI |
| physical_specimen_location |
UCSDMI |
| physical_specimen_remaining |
true |
| pku |
I do not have this condition |
| pool_frequency |
Rarely (a few times/month) |
| poultry_frequency |
Regularly (3-5 times/week) |
| pregnant |
No |
| prepared_meals_frequency |
Occasionally (1-2 times/week) |
| probiotic_frequency |
Rarely (a few times/month) |
| public |
true |
| race |
Caucasian |
| ready_to_eat_meals_frequency |
Rarely (less than once/week) |
| red_meat_frequency |
Occasionally (1-2 times/week) |
| required_sample_info_status |
completed |
| roommates_in_study |
No |
| salted_snacks_frequency |
Rarely (less than once/week) |
| sample name |
qiime_ppdid_586:10288.000026615 |
| sample type |
Stool |
| seafood_frequency |
Occasionally (1-2 times/week) |
| seasonal_allergies |
true |
| sex |
female |
| skin_condition |
I do not have this condition |
| sleep_duration |
8 or more hours |
| smoking_frequency |
Never |
| state |
CA |
| sugar_sweetened_drink_frequency |
Occasionally (1-2 times/week) |
| sugary_sweets_frequency |
Never |
| supplements |
COQ10, ALPHA LIPOIC ACID,VITMAIN B12 METHYL INJECTION, METHYLFOLATE, SILYMARIN, MUSHROOM EXTRACTS |
| survey_id |
94351947ef791bc3 |
| teethbrushing_frequency |
Daily |
| thyroid |
I do not have this condition |
| tonsils_removed |
No |
| tot_mass |
86.18265279 |
| types_of_plants |
Regularly (3-5 times/week) |
| vegetable_frequency |
Daily |
| vitamin_b_supplement_frequency |
Regularly (3-5 times/week) |
| vitamin_d_supplement_frequency |
Decreased more than 10 pounds |
| weight_change |
86.18265279 |
| weight_units |
kilograms |
| whole_eggs |
Regularly (3-5 times/week) |
| whole_grain_frequency |
Occasionally (1-2 times/week) |
| willing_to_be_contacted |
false |