home > sra-sample > ERS877308
identifier ERS877308
type sra-sample
sameAs
biosample  SAMEA3570159
organism human gut metagenome
attributes
ENA first public  2015-10-04
ENA last update  2018-03-09
External Id  SAMEA3570159
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2015-10-04T17:01:06Z
INSDC last update  2018-03-09T13:32:34Z
INSDC status  public
Submitter Id  qiime_ppdid_586:10288.000027229
acne medication  false
acne_medication_otc  false
add_adhd  I do not have this condition
age years  43
alcohol_frequency  Rarely (a few times/month)
alcohol_types_beer_cider  false
alcohol_types_red_wine  false
alcohol_types_sour_beers  false
alcohol_types_spirits_hard_alcohol  true
alcohol_types_unspecified  false
alcohol_types_white_wine  false
allergic to i have no food allergies that i know of  false
allergic_to_other  true
allergic_to_peanuts  false
allergic_to_shellfish  false
allergic_to_tree_nuts  false
allergic_to_unspecified  false
altitude  0
alzheimers  I do not have this condition
anonymized name  27229
antibiotic_select  Year
appendix_removed  Yes
asd  I do not have this condition
assigned_from_geo  true
birth year  1973
bmi  26.60841755
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  One
bowel_movement_quality  I tend to be constipated (have difficulty passing stool)
breastmilk_formula_ensure  No
cardiovascular_disease  I do not have this condition
cat  false
cdiff  Self-diagnosed
chickenpox  Yes
clinical condition  I do not have this condition
collection date  6/8/15 0:00
collection_timestamp  6/8/15 0:00
common name  human gut metagenome
conditions_medication  true
consume_animal_products_abx  Yes
contraceptive  No
cosmetics_frequency  Never
country  USA
country of birth  United States
csection  Not sure
deodorant_use  I do not use deodorant or an antiperspirant
depression_bipolar_schizophrenia  I do not have this condition
depth  0
diabetes  I do not have this condition
diet type  Omnivore
diet_restrictions_list  I believe I suffer from Glutten, so I don_t eat any for the last two months. I also take probiotic, or if I don_t I will start cramping and hurting.
dna_extracted  true
dog  true
dog_contact  schnauzer, daily
dog_location  indoor
drinking_water_source  Filtered
elevation  64.6
env biome  ENVO:dense settlement biome
env feature  ENVO:human-associated habitat
env matter  ENVO:feces
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Occasionally (1-2 times/week)
exercise_location  Outdoors
fed_as_infant  Primarily infant formula
fermented_plant_frequency  Never
flossing_frequency  Never
flu_vaccine_date  I have not gotten the flu vaccine in the past year.
frozen_desert_frequency  Occasionally (1-2 times/week)
fruit_frequency  Occasionally (1-2 times/week)
fungal_overgrowth  Self-diagnosed
gluten  I do not eat gluten because it makes me feel bad
hand  I am ambidextrous
has_physical_specimen  true
height cm  172.72
height or length  172.72
height_units  centimeters
high_fat_red_meat_frequency  Regularly (3-5 times/week)
homecooked_meals_frequency  Regularly (3-5 times/week)
host subject id  470e37d37e053e593ff0eabce421387f
host taxid  9606
ibd  Self-diagnosed
ibs  Diagnosed by a medical professional (doctor, physician assistant)
kidney_disease  I do not have this condition
lactose  true
last_move  I have lived in my current state of residence for more than a year.
last_travel  1 year
latitude  32.4
level_of_education  High School or GED equilivant
livingwith  Yes
longitude  -93.7
lowgrain_diet_type  true
lung disease  I do not have this condition
meat_eggs_frequency  Regularly (3-5 times/week)
medication_list  Digestive Gold
migraine  I do not have this condition
milk_cheese_frequency  Rarely (less than once/week)
milk_substitute_frequency  Rarely (less than once/week)
multivitamin  false
nail  false
non_food_allergies_beestings  false
non_food_allergies_drug__e_g__penicillin_  false
non_food_allergies_pet_dander  false
non_food_allergies_poison_ivy_oak  true
non_food_allergies_sun  false
non_food_allergies_unspecified  false
olive_oil  Occasionally (1-2 times/week)
one_liter_of_water_a_day_frequency  Daily
other_supplement_frequency  true
physical_sample_location  UCSDMI
physical_specimen_location  UCSDMI
physical_specimen_remaining  true
pool_frequency  Occasionally (1-2 times/week)
poultry_frequency  Regularly (3-5 times/week)
pregnant  No
prepared_meals_frequency  Regularly (3-5 times/week)
probiotic_frequency  Daily
public  true
race  Caucasian
ready_to_eat_meals_frequency  Never
red_meat_frequency  Regularly (3-5 times/week)
required_sample_info_status  completed
roommates_in_study  No
salted_snacks_frequency  Regularly (3-5 times/week)
sample name  qiime_ppdid_586:10288.000027229
sample type  Stool
seafood_frequency  Rarely (less than once/week)
seasonal_allergies  true
sex  male
sibo  Self-diagnosed
skin_condition  Diagnosed by a medical professional (doctor, physician assistant)
sleep_duration  6-7 hours
smoking_frequency  Never
softener  false
special_restrictions  true
state  LA
sugar_sweetened_drink_frequency  Regularly (3-5 times/week)
sugary_sweets_frequency  Never
supplements  probiotics and digestive enzymes
survey_id  79919fc8a14e4a75
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  No
tot_mass  79.37875915
types_of_plants  Regularly (3-5 times/week)
vegetable_frequency  Never
vitamin_b_supplement_frequency  Never
vitamin_d_supplement_frequency  Remained stable
weight_change  79.37875915
weight_units  kilograms
whole_eggs  Regularly (3-5 times/week)
whole_grain_frequency  Rarely (less than once/week)
willing_to_be_contacted  true
properties 
{...}
dbXrefs
bioproject  PRJEB11170
sra-run  ERR1040093
sra-submission  ERA500968
biosample  SAMEA3570159
sra-study  ERP012511
sra-experiment  ERX1119565
distribution JSONJSON-LD
Download
ERA500968.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2015-10-05T18:21:57Z
dateModified 2021-09-23T12:36:56Z
datePublished 2015-10-22T17:30:04Z