home > sra-sample > ERS877520
identifier ERS877520
type sra-sample
sameAs
biosample　 SAMEA3570371
organism human gut metagenome
attributes
ENA first public　 2015-10-04
ENA last update　 2018-03-09
External Id　 SAMEA3570371
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2015-10-04T17:01:05Z
INSDC last update　 2018-03-09T13:32:18Z
INSDC status　 public
Submitter Id　 qiime_ppdid_586:10288.000029164
acne medication　 false
acne_medication_otc　 false
add_adhd　 I do not have this condition
age years　 56
alcohol_frequency　 Regularly (3-5 times/week)
alcohol_types_beer_cider　 true
alcohol_types_red_wine　 true
alcohol_types_sour_beers　 false
alcohol_types_spirits_hard_alcohol　 false
alcohol_types_unspecified　 false
alcohol_types_white_wine　 false
allergic to i have no food allergies that i know of　 false
allergic_to_other　 false
allergic_to_peanuts　 true
allergic_to_shellfish　 true
allergic_to_tree_nuts　 false
allergic_to_unspecified　 false
altitude　 0
alzheimers　 I do not have this condition
anonymized name　 29164
antibiotic_select　 I have not taken antibiotics in the past year.
appendix_removed　 Yes
asd　 I do not have this condition
assigned_from_geo　 true
autoimmune　 I do not have this condition
birth year　 1959
bmi　 35.9595098
body habitat　 UBERON:feces
body product　 UBERON:feces
body site　 UBERON:feces
bowel_movement_frequency　 Two
bowel_movement_quality　 I tend to have normal formed stool
breastmilk_formula_ensure　 No
cardiovascular_disease　 I do not have this condition
cat　 true
cat_contact　 daily physical contact with four cats
cat_location　 indoors
cdiff　 I do not have this condition
chickenpox　 Yes
clinical condition　 I do not have this condition
collection date　 7/3/15 0:00
collection_timestamp　 7/3/15 0:00
common name　 human gut metagenome
conditions_medication　 true
consume_animal_products_abx　 No
contraceptive　 No
cosmetics_frequency　 Rarely (a few times/month)
country　 USA
country of birth　 United States
csection　 No
deodorant_use　 I use deodorant
depression_bipolar_schizophrenia　 I do not have this condition
depth　 0
diabetes　 I do not have this condition
diet type　 Omnivore
dna_extracted　 true
dog　 true
dog_contact　 daily physical contact with dog
dog_location　 indoor/outdoor
drinking_water_source　 Filtered
elevation　 201
env biome　 ENVO:dense settlement biome
env feature　 ENVO:human-associated habitat
env matter　 ENVO:feces
epilepsy_or_seizure_disorder　 I do not have this condition
exercise_frequency　 Rarely (a few times/month)
exercise_location　 None of the above
fed_as_infant　 Primarily infant formula
fermented_plant_frequency　 Rarely (less than once/week)
flossing_frequency　 Occasionally (1-2 times/week)
flu_vaccine_date　 Year
frozen_desert_frequency　 Rarely (less than once/week)
fruit_frequency　 Regularly (3-5 times/week)
fungal_overgrowth　 Diagnosed by an alternative medicine practitioner
gluten　 No
hand　 I am right handed
has_physical_specimen　 true
height cm　 160.02
height or length　 160.02
height_units　 centimeters
high_fat_red_meat_frequency　 Rarely (less than once/week)
homecooked_meals_frequency　 Daily
host subject id　 ebfb8ae3c970b27b5806888c3c80240d
host taxid　 9606
ibd　 I do not have this condition
ibs　 I do not have this condition
kidney_disease　 I do not have this condition
lactose　 false
last_move　 I have lived in my current state of residence for more than a year.
last_travel　 I have not been outside of my country of residence in the past year.
latitude　 38.7
level_of_education　 Bachelor's degree
liver_disease　 Diagnosed by a medical professional (doctor, physician assistant)
livingwith　 No
longitude　 -90.4
lowgrain_diet_type　 true
lung disease　 I do not have this condition
meat_eggs_frequency　 Regularly (3-5 times/week)
medication_list　 valacyclovir 500mg 2x daily, levothyroxine 50mcg daily, Pristine 50mg daily
migraine　 I do not have this condition
milk_cheese_frequency　 Rarely (less than once/week)
milk_substitute_frequency　 Never
multivitamin　 true
nail　 false
non_food_allergies_beestings　 false
non_food_allergies_drug__e_g__penicillin_　 true
non_food_allergies_pet_dander　 false
non_food_allergies_poison_ivy_oak　 false
non_food_allergies_sun　 false
non_food_allergies_unspecified　 false
olive_oil　 Regularly (3-5 times/week)
one_liter_of_water_a_day_frequency　 Rarely (less than once/week)
other_supplement_frequency　 true
physical_sample_location　 UCSDMI
physical_specimen_location　 UCSDMI
physical_specimen_remaining　 true
pku　 I do not have this condition
pool_frequency　 Never
poultry_frequency　 Occasionally (1-2 times/week)
pregnant　 No
prepared_meals_frequency　 Rarely (less than once/week)
probiotic_frequency　 Occasionally (1-2 times/week)
public　 true
race　 Caucasian
ready_to_eat_meals_frequency　 Never
red_meat_frequency　 Occasionally (1-2 times/week)
required_sample_info_status　 completed
roommates_in_study　 No
salted_snacks_frequency　 Regularly (3-5 times/week)
sample name　 qiime_ppdid_586:10288.000029164
sample type　 Stool
seafood_frequency　 Rarely (less than once/week)
seasonal_allergies　 false
sex　 female
sibo　 I do not have this condition
skin_condition　 I do not have this condition
sleep_duration　 7-8 hours
smoking_frequency　 Never
softener　 false
special_restrictions　 false
state　 MO
sugar_sweetened_drink_frequency　 Occasionally (1-2 times/week)
sugary_sweets_frequency　 Never
supplements　 Alpha Lipoic Acid, Turmeric, Fish Oil
survey_id　 9e12a0c36c63dddf
teethbrushing_frequency　 Daily
thyroid　 Diagnosed by an alternative medicine practitioner
tonsils_removed　 No
tot_mass　 92.07936062
types_of_plants　 Regularly (3-5 times/week)
vegetable_frequency　 Daily
vitamin_b_supplement_frequency　 Daily
vitamin_d_supplement_frequency　 Remained stable
weight_change　 92.07936062
weight_units　 kilograms
whole_eggs　 Occasionally (1-2 times/week)
whole_grain_frequency　 Occasionally (1-2 times/week)
willing_to_be_contacted　 true
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB11170
sra-run　 ERR1040293
sra-submission　 ERA500968
biosample　 SAMEA3570371
sra-study　 ERP012511
sra-experiment　 ERX1119765
distribution JSONJSON-LD
Download
ERA500968.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2015-10-05T18:24:16Z
dateModified 2021-09-23T12:38:30Z
datePublished 2015-10-22T17:30:42Z