home > sra-sample > ERS877531
identifier ERS877531
type sra-sample
sameAs
biosample　 SAMEA3570382
organism human gut metagenome
attributes
ENA first public　 2015-10-04
ENA last update　 2018-03-09
External Id　 SAMEA3570382
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2015-10-04T17:01:05Z
INSDC last update　 2018-03-09T13:32:18Z
INSDC status　 public
Submitter Id　 qiime_ppdid_586:10288.000029300
acne medication　 false
acne_medication_otc　 false
add_adhd　 I do not have this condition
age years　 55
alcohol_frequency　 Daily
alcohol_types_beer_cider　 true
alcohol_types_red_wine　 true
alcohol_types_sour_beers　 false
alcohol_types_spirits_hard_alcohol　 false
alcohol_types_unspecified　 false
alcohol_types_white_wine　 false
allergic to i have no food allergies that i know of　 true
allergic_to_other　 false
allergic_to_peanuts　 false
allergic_to_shellfish　 false
allergic_to_tree_nuts　 false
allergic_to_unspecified　 false
altitude　 0
alzheimers　 I do not have this condition
anonymized name　 29300
antibiotic_select　 I have not taken antibiotics in the past year.
appendix_removed　 No
asd　 Diagnosed by an alternative medicine practitioner
assigned_from_geo　 true
autoimmune　 I do not have this condition
birth year　 1961
bmi　 27.46368812
body habitat　 UBERON:feces
body product　 UBERON:feces
body site　 UBERON:feces
bowel_movement_frequency　 One
bowel_movement_quality　 I tend to have diarrhea (watery stool)
breastmilk_formula_ensure　 No
cardiovascular_disease　 I do not have this condition
cat　 false
cdiff　 I do not have this condition
chickenpox　 Yes
clinical condition　 I do not have this condition
collection date　 6/23/15 0:00
collection_timestamp　 6/23/15 0:00
common name　 human gut metagenome
conditions_medication　 false
consume_animal_products_abx　 Not sure
contraceptive　 No
cosmetics_frequency　 Regularly (3-5 times/week)
country　 United Kingdom
country of birth　 United Kingdom
csection　 No
deodorant_use　 I use an antiperspirant
depression_bipolar_schizophrenia　 I do not have this condition
depth　 0
diabetes　 I do not have this condition
diet type　 Omnivore
dna_extracted　 true
dog　 true
dog_contact　 play with
dog_location　 indoor
drinking_water_source　 Well
elevation　 83.5
env biome　 ENVO:dense settlement biome
env feature　 ENVO:human-associated habitat
env matter　 ENVO:feces
epilepsy_or_seizure_disorder　 I do not have this condition
exercise_frequency　 Occasionally (1-2 times/week)
exercise_location　 Both
fed_as_infant　 Primarily infant formula
fermented_plant_frequency　 Never
flossing_frequency　 Rarely (a few times/month)
flu_vaccine_date　 I have not gotten the flu vaccine in the past year.
frozen_desert_frequency　 Rarely (less than once/week)
fruit_frequency　 Regularly (3-5 times/week)
fungal_overgrowth　 I do not have this condition
gluten　 No
hand　 I am right handed
has_physical_specimen　 true
height cm　 162.56
height or length　 162.56
height_units　 centimeters
high_fat_red_meat_frequency　 Rarely (less than once/week)
homecooked_meals_frequency　 Regularly (3-5 times/week)
host subject id　 301cd9393ba17108e93eaa2133c213c2
host taxid　 9606
ibd　 I do not have this condition
ibs　 I do not have this condition
kidney_disease　 I do not have this condition
lactose　 false
last_move　 I have lived in my current state of residence for more than a year.
last_travel　 6 months
latitude　 51.4
level_of_education　 Bachelor's degree
liver_disease　 I do not have this condition
livingwith　 No
longitude　 0.1
lowgrain_diet_type　 false
lung disease　 I do not have this condition
meat_eggs_frequency　 Regularly (3-5 times/week)
migraine　 I do not have this condition
milk_cheese_frequency　 Regularly (3-5 times/week)
milk_substitute_frequency　 Never
multivitamin　 false
nail　 false
non_food_allergies_beestings　 false
non_food_allergies_drug__e_g__penicillin_　 false
non_food_allergies_pet_dander　 false
non_food_allergies_poison_ivy_oak　 false
non_food_allergies_sun　 false
non_food_allergies_unspecified　 true
olive_oil　 Regularly (3-5 times/week)
one_liter_of_water_a_day_frequency　 Rarely (less than once/week)
other_supplement_frequency　 false
physical_sample_location　 UCSDMI
physical_specimen_location　 UCSDMI
physical_specimen_remaining　 true
pku　 I do not have this condition
pool_frequency　 Rarely (a few times/month)
poultry_frequency　 Occasionally (1-2 times/week)
pregnant　 No
prepared_meals_frequency　 Rarely (less than once/week)
probiotic_frequency　 Rarely (a few times/month)
public　 true
race　 Caucasian
ready_to_eat_meals_frequency　 Rarely (less than once/week)
red_meat_frequency　 Occasionally (1-2 times/week)
required_sample_info_status　 completed
roommates　 Two
roommates_in_study　 No
salted_snacks_frequency　 Regularly (3-5 times/week)
sample name　 qiime_ppdid_586:10288.000029300
sample type　 Stool
seafood_frequency　 Daily
seasonal_allergies　 false
sex　 female
sibo　 I do not have this condition
skin_condition　 I do not have this condition
sleep_duration　 7-8 hours
smoking_frequency　 Never
softener　 false
special_restrictions　 false
sugar_sweetened_drink_frequency　 Occasionally (1-2 times/week)
sugary_sweets_frequency　 Rarely (less than once/week)
survey_id　 37e7a9fd39b4b50f
teethbrushing_frequency　 Daily
thyroid　 I do not have this condition
tonsils_removed　 No
tot_mass　 72.57486551
travel_locations_list　 Hong Kong Vietnam and Cambodia
types_of_plants　 Occasionally (1-2 times/week)
vegetable_frequency　 Never
vitamin_b_supplement_frequency　 Never
vitamin_d_supplement_frequency　 Remained stable
weight_change　 72.57486551
weight_units　 kilograms
whole_eggs　 Regularly (3-5 times/week)
whole_grain_frequency　 Regularly (3-5 times/week)
willing_to_be_contacted　 true
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB11170
sra-run　 ERR1040304
sra-submission　 ERA500968
biosample　 SAMEA3570382
sra-study　 ERP012511
sra-experiment　 ERX1119776
distribution JSONJSON-LD
Download
ERA500968.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2015-10-05T18:24:18Z
dateModified 2021-09-23T12:38:34Z
datePublished 2015-10-22T17:30:43Z