| ENA first public |
2015-10-04 |
| ENA last update |
2018-03-09 |
| External Id |
SAMEA3570410 |
| INSDC center alias |
UCSDMI |
| INSDC center name |
University of California San Diego Microbiome Initiative |
| INSDC first public |
2015-10-04T17:01:05Z |
| INSDC last update |
2018-03-09T13:32:18Z |
| INSDC status |
public |
| Submitter Id |
qiime_ppdid_586:10288.000029378 |
| acne medication |
false |
| acne_medication_otc |
false |
| add_adhd |
I do not have this condition |
| age years |
65 |
| alcohol_frequency |
Daily |
| alcohol_types_beer_cider |
true |
| alcohol_types_red_wine |
true |
| alcohol_types_sour_beers |
false |
| alcohol_types_spirits_hard_alcohol |
false |
| alcohol_types_unspecified |
false |
| alcohol_types_white_wine |
true |
| allergic to i have no food allergies that i know of |
true |
| allergic_to_other |
false |
| allergic_to_peanuts |
false |
| allergic_to_shellfish |
false |
| allergic_to_tree_nuts |
false |
| allergic_to_unspecified |
false |
| altitude |
0 |
| alzheimers |
I do not have this condition |
| anonymized name |
29378 |
| antibiotic_select |
Year |
| appendix_removed |
Yes |
| asd |
I do not have this condition |
| assigned_from_geo |
true |
| autoimmune |
I do not have this condition |
| birth year |
1950 |
| bmi |
27.058177500000006 |
| body habitat |
UBERON:feces |
| body product |
UBERON:feces |
| body site |
UBERON:feces |
| bowel_movement_frequency |
Three |
| bowel_movement_quality |
I don't know, I do not have a point of reference |
| cardiovascular_disease |
I do not have this condition |
| cat |
false |
| cdiff |
I do not have this condition |
| chickenpox |
Not sure |
| clinical condition |
Diagnosed by a medical professional (doctor, physician assistant) |
| collection date |
6/23/15 0:00 |
| collection_timestamp |
6/23/15 0:00 |
| common name |
human gut metagenome |
| conditions_medication |
true |
| consume_animal_products_abx |
Not sure |
| contraceptive |
No |
| cosmetics_frequency |
Never |
| country |
United Kingdom |
| country of birth |
United Kingdom |
| csection |
No |
| deodorant_use |
Not sure, but I use some form of deodorant/antiperspirant |
| depression_bipolar_schizophrenia |
I do not have this condition |
| depth |
0 |
| diabetes |
I do not have this condition |
| diet type |
Omnivore |
| dna_extracted |
true |
| dog |
false |
| drinking_water_source |
City |
| elevation |
17.2 |
| env biome |
ENVO:dense settlement biome |
| env feature |
ENVO:human-associated habitat |
| env matter |
ENVO:feces |
| epilepsy_or_seizure_disorder |
I do not have this condition |
| exercise_frequency |
Occasionally (1-2 times/week) |
| exercise_location |
Indoors |
| fed_as_infant |
Primarily breast milk |
| fermented_plant_frequency |
Never |
| flossing_frequency |
Rarely (a few times/month) |
| flu_vaccine_date |
Year |
| frozen_desert_frequency |
Rarely (less than once/week) |
| fruit_frequency |
Occasionally (1-2 times/week) |
| fungal_overgrowth |
I do not have this condition |
| gluten |
No |
| hand |
I am right handed |
| has_physical_specimen |
true |
| height cm |
180.34 |
| height or length |
180.34 |
| height_units |
centimeters |
| high_fat_red_meat_frequency |
Occasionally (1-2 times/week) |
| homecooked_meals_frequency |
Occasionally (1-2 times/week) |
| host subject id |
f5d57e6c468d2bc22f0a5e1e7a7a8aea |
| host taxid |
9606 |
| ibd |
Diagnosed by a medical professional (doctor, physician assistant) |
| ibs |
I do not have this condition |
| kidney_disease |
I do not have this condition |
| lactose |
false |
| last_move |
I have lived in my current state of residence for more than a year. |
| last_travel |
I have not been outside of my country of residence in the past year. |
| latitude |
50.8 |
| level_of_education |
Graduate or Professional degree |
| liver_disease |
I do not have this condition |
| livingwith |
No |
| longitude |
-1 |
| lowgrain_diet_type |
false |
| lung disease |
Diagnosed by a medical professional (doctor, physician assistant) |
| meat_eggs_frequency |
Regularly (3-5 times/week) |
| medication_list |
Lanzoprazole For IBD, I take Infliximab, Entocort, Pentasa, Codeine, and from time to time Azathioprine and Prednisalone. |
| migraine |
I do not have this condition |
| milk_cheese_frequency |
Regularly (3-5 times/week) |
| milk_substitute_frequency |
Rarely (less than once/week) |
| multivitamin |
true |
| nail |
false |
| non_food_allergies_beestings |
false |
| non_food_allergies_drug__e_g__penicillin_ |
true |
| non_food_allergies_pet_dander |
false |
| non_food_allergies_poison_ivy_oak |
false |
| non_food_allergies_sun |
false |
| non_food_allergies_unspecified |
false |
| olive_oil |
Regularly (3-5 times/week) |
| one_liter_of_water_a_day_frequency |
Regularly (3-5 times/week) |
| other_condtitions_list |
Crohn_s disease Barrett_s Oesophagus |
| other_supplement_frequency |
true |
| physical_sample_location |
UCSDMI |
| physical_specimen_location |
UCSDMI |
| physical_specimen_remaining |
true |
| pku |
I do not have this condition |
| pool_frequency |
Never |
| poultry_frequency |
Occasionally (1-2 times/week) |
| pregnant |
No |
| prepared_meals_frequency |
Rarely (less than once/week) |
| probiotic_frequency |
Rarely (a few times/month) |
| public |
true |
| race |
Caucasian |
| ready_to_eat_meals_frequency |
Occasionally (1-2 times/week) |
| red_meat_frequency |
Regularly (3-5 times/week) |
| required_sample_info_status |
completed |
| roommates_in_study |
No |
| salted_snacks_frequency |
Occasionally (1-2 times/week) |
| sample name |
qiime_ppdid_586:10288.000029378 |
| sample type |
Stool |
| seafood_frequency |
Regularly (3-5 times/week) |
| seasonal_allergies |
false |
| sex |
male |
| sibo |
Self-diagnosed |
| skin_condition |
Diagnosed by a medical professional (doctor, physician assistant) |
| sleep_duration |
6-7 hours |
| smoking_frequency |
Never |
| softener |
false |
| special_restrictions |
false |
| sugar_sweetened_drink_frequency |
Occasionally (1-2 times/week) |
| sugary_sweets_frequency |
Occasionally (1-2 times/week) |
| supplements |
multivitamin tablets |
| survey_id |
ed2f7ba3d6e9517e |
| teethbrushing_frequency |
Daily |
| thyroid |
I do not have this condition |
| tonsils_removed |
No |
| tot_mass |
88 |
| types_of_plants |
Regularly (3-5 times/week) |
| vegetable_frequency |
Daily |
| vitamin_b_supplement_frequency |
Daily |
| vitamin_d_supplement_frequency |
Remained stable |
| weight_change |
88 |
| weight_units |
kilograms |
| whole_eggs |
Occasionally (1-2 times/week) |
| whole_grain_frequency |
Occasionally (1-2 times/week) |
| willing_to_be_contacted |
true |