ENA first public |
2015-10-28 |
ENA last update |
2018-03-09 |
External Id |
SAMEA3639004 |
INSDC center alias |
UCSDMI |
INSDC center name |
University of California San Diego Microbiome Initiative |
INSDC first public |
2015-10-28T17:01:31Z |
INSDC last update |
2018-03-09T09:26:03Z |
INSDC status |
public |
Submitter Id |
qiita_sid_10315:10315.APAL10 |
anonymized name |
APAL10 |
assigned_from_geo |
false |
barcode |
CACGTTTATTCC |
center_name |
UC Boulder |
collection_timestamp |
12:00:00 PM |
common name |
mantled howler monkey |
common name |
primate metagenome |
country |
Nicaragua |
diet |
folivore |
disturbance |
Fragment |
dna_extracted |
true |
env biome |
ENVO:tropical broadleaf forest biome |
env feature |
ENVO:animalia-associated habitat |
env matter |
ENVO:feces |
experiment_design_description |
Exploration of primate gut microbiota across diets and phylogeny |
habitat2 |
Dry Forest |
host common name |
mantled howler monkeys |
host subject id |
APAL10 |
host taxid |
30589 |
instrument model |
Illumina MiSeq |
latitude |
11.5 |
library construction protocol |
16S |
longitude |
-85.58 |
physical_speciman_location |
Northwestern University |
physical_specimen_location |
Northwestern University |
physical_specimen_remaining |
true |
platform |
Illumina |
primer |
GTGTGCCAGCMGCCGCGGTAA |
public |
true |
required_sample_info_status |
completed |
run prefix |
foliv_R01 |
sample name |
qiita_sid_10315:10315.APAL10 |
sample type |
stool |
season |
Leaf |
social group |
HMY |
species |
Apalliata |