| ENA first public |
2015-10-28 |
| ENA last update |
2018-03-09 |
| External Id |
SAMEA3639008 |
| INSDC center alias |
UCSDMI |
| INSDC center name |
University of California San Diego Microbiome Initiative |
| INSDC first public |
2015-10-28T17:01:31Z |
| INSDC last update |
2018-03-09T09:24:22Z |
| INSDC status |
public |
| Submitter Id |
qiita_sid_10315:10315.APAL14 |
| anonymized name |
APAL14 |
| assigned_from_geo |
false |
| barcode |
TTACGTGGCGAT |
| center_name |
UC Boulder |
| collection_timestamp |
12:00:00 PM |
| common name |
mantled howler monkey |
| common name |
primate metagenome |
| country |
Nicaragua |
| diet |
folivore |
| disturbance |
Fragment |
| dna_extracted |
true |
| env biome |
ENVO:tropical broadleaf forest biome |
| env feature |
ENVO:animalia-associated habitat |
| env matter |
ENVO:feces |
| experiment_design_description |
Exploration of primate gut microbiota across diets and phylogeny |
| habitat2 |
Dry Forest |
| host common name |
mantled howler monkeys |
| host subject id |
APAL14 |
| host taxid |
30589 |
| instrument model |
Illumina MiSeq |
| latitude |
11.5 |
| library construction protocol |
16S |
| longitude |
-85.58 |
| physical_speciman_location |
Northwestern University |
| physical_specimen_location |
Northwestern University |
| physical_specimen_remaining |
true |
| platform |
Illumina |
| primer |
GTGTGCCAGCMGCCGCGGTAA |
| public |
true |
| required_sample_info_status |
completed |
| run prefix |
foliv_R01 |
| sample name |
qiita_sid_10315:10315.APAL14 |
| sample type |
stool |
| season |
Leaf |
| social group |
WTF |
| species |
Apalliata |