| sequencing method |
454 |
| nucleic acid extraction |
not determined |
| environment (feature) |
human-associated habitat [ENVO:00009003] |
| host taxid |
9606 |
| misc_param: HMP supersite |
gastrointestinal_tract |
| isolation-source |
missing |
| project_name |
Shigella sp. D9 |
| source_mat_id |
BEI HM-87 |
| sop |
http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf |
| ref_biomaterial |
not determined |
| collection date |
not determined |
| environment (material) |
biological product [ENVO:02000043] |
| project_type |
Reference Genome |
| geo_loc_name |
not determined |
| finishing strategy (depth of coverage) |
Level 2: High-Quality Draft16.95x;98 |
| lat_lon |
not determined |
| env_package |
missing |
| environment (biome) |
terrestrial biome [ENVO:00000446] |
| host |
Homo sapiens |
| isol_growth_condt |
not determined |
| estimated_size |
4717000 |
| strain |
D9 |
| num_replicons |
not determined |
| assembly |
Newbler 2.0.0-PostRelease-1/21/2009 |
| misc_param: HMP body site |
not determined |
| investigation_type |
bacteria_archaea |
| BioSampleModel |
MIGS.ba |