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Taxon	Taxonomy ID	Rank	Common Name
Metamonada ↑	2611341	clade
Anaeramoebidae	3113901	family
Anaeramoeba	2055135	genus
- Anaeramoeba flamelloides	1746091	species
- Anaeramoeba gargantua	1746095	species
- Anaeramoeba ignava	1746090	species
- Anaeramoeba megacephala	1746094	species
- Anaeramoeba oblonga	1746092	species
- Anaeramoeba parva	1746093	species
Fornicata	207245	phylum
Carpediemonas-like organisms	1265909	clade
Aduncisulcus	2918882	genus
- Aduncisulcus paluster	2918883	species
Carpediemonas	201152	genus
- Carpediemonas frisia	1869112	species
- Carpediemonas membranifera	201153	species
environmental samples	1275959	no rank
unclassified Carpediemonas	2629244	no rank
Dysnectes	391065	genus
- Dysnectes brevis	391066	species
unclassified Dysnectes	2638612	no rank
Ergobibamus	926445	genus
- Ergobibamus cyprinoides	926446	species
Hicanonectes	658076	genus
- Hicanonectes teleskopos	658077	species
unclassified Hicanonectes	2811743	no rank
Kipferlia	797121	genus
- Kipferlia bialata	797122	species
Caviomonadidae	1911808	family
Euthynema	2966631	genus
- Euthynema mutabile	2926555	species
Iotanema	1911809	genus
- Iotanema spirale	1861839	species
Diplomonadida	5738	order	diplomonads
- Enteromonadidae	306054	family
Hexamitidae	5739	family
Giardiinae	68459	subfamily
Hexamitinae	68460	subfamily
environmental samples	1275950	no rank
unclassified Hexamitidae	2662426	no rank
Retortamonadidae	193075	family	retortamonads
Chilomastix	450634	genus
- Chilomastix caulleryi	926448	species
- Chilomastix cuspidata	1476591	species
- Chilomastix mesnili	472572	species
- Chilomastix wenrichi	450635	species
unclassified Chilomastix	2619685	no rank
Retortamonas	193076	genus
- Retortamonas cf. caviae	2767795	species
- Retortamonas dobelli	2767781	species
unclassified Retortamonas	2315451	no rank
unclassified Retortamonadidae	1476594	no rank
- Retortamonadidae sp. IC-2014a	1476595	species
- Retortamonadidae sp. IC-2014b	1476596	species
- Retortamonadidae sp. IC-2014c	1476597	species
- Retortamonadidae sp. IC-2014d	1476598	species
unclassified Fornicata	1861838	no rank
- Fornicata sp.	3387784	species
- Fornicata sp. PCS-ghost	2926554	species
Metamonada incertae sedis	2683626	no rank
Barthelona	2654831	genus
unclassified Barthelona	2685814	no rank
- Barthelona sp. EYP1702	2654834	species
- Barthelona sp. FB11	2654835	species
- Barthelona sp. LRM2	2654836	species
- Barthelona sp. PAP020	2654833	species
- Barthelona sp. PAP514	3455449	species
- Barthelona sp. PCE	2654837	species
Skoliomonas	3349428	genus
- Skoliomonas litria	3126597	species
unclassified Skoliomonas	3349429	no rank
- Eukaryota sp. YEglit-2024b	3126598	species
Parabasalia	5719	phylum	parabasalians; parabasalids
Cristamonadida	740976	order
Caduceia	402893	genus
- Caduceia versatilis	402894	species
Calonympha	47795	genus
- Calonympha chia	906894	species
- Calonympha grassii	181553	species
unclassified Calonympha	2649361	no rank
Coronympha	39248	genus
- Coronympha clevelandii	1295062	species
- Coronympha koidzumia	668997	species
- Coronympha mackinnonia	668998	species
- Coronympha octonaria	39139	species
- Coronympha sutherlandia	668996	species
- Coronympha valentinia	668995	species
Deltotrichonympha	246725	genus
- Deltotrichonympha nana	246726	species
- Deltotrichonympha operculata	246727	species
unclassified Deltotrichonympha	2626788	no rank
Devescovina	48979	genus
- Devescovina arta	641596	species
- Devescovina aymara	2770082	species
- Devescovina lepida	641595	species
- Devescovina sapara	2770083	species
unclassified Devescovina	2637237	no rank
Foaina	561875	genus
- Foaina nana	561876	species
Gigantomonas	561873	genus
- Gigantomonas herculea	561874	species
Glissandra	3418699	genus
unclassified Glissandra	3418706	no rank
Joenia	450819	genus
- Joenia annectens	450820	species
unclassified Joenia	2641685	no rank
Joenina	561865	genus
- Joenina pulchella	561866	species
Joenoides	561867	genus
- Joenoides intermedia	561868	species
Kofoidia	1507187	genus
- Kofoidia loriculata	1507184	species
Koruga	87538	genus
- Koruga bonita	87539	species
Macrotrichomonas	47797	genus
- Macrotrichomonas ashaninka	2770085	species
- Macrotrichomonas lightii	1590806	species
- Macrotrichomonas secoya	2770086	species
- Macrotrichomonas yanesha	2770087	species
unclassified Macrotrichomonas	2641320	no rank
Macrotrichomonoides	1604039	genus
- Macrotrichomonoides restis	47798	species
Metacoronympha	181551	genus
- Metacoronympha senta	181552	species
Metadevescovina	39062	genus
- Metadevescovina cuspidata	561881	species
- Metadevescovina extranea	41452	species
- Metadevescovina modica	530039	species
- Metadevescovina polyspira	39063	species
unclassified Metadevescovina	2621285	no rank
Mixotricha	246722	genus
- Mixotricha paradoxa	246723	species
Runanympha	2828285	genus
- Runanympha illapa	2770090	species
- Runanympha pacha	2770091	species
Snyderella	181546	genus
- Snyderella caral	3043603	species
- Snyderella chachapoya	3043604	species
- Snyderella kirbyi	906895	species
- Snyderella nazca	3043605	species
- Snyderella swezyae	906903	species
- Snyderella tabogae	181547	species
- Snyderella valdivia	3043606	species
- Snyderella yamini	931973	species
Stephanonympha	336693	genus
- Stephanonympha nelumbium	402892	species
unclassified Stephanonympha	2640414	no rank
Honigbergiellida	740974	order
Cthulhuidae	3158796	family
Cthulhu	1312500	genus
Cthylla	1312502	genus
Nyarlathotep	3158797	genus
Hexamastigidae	740975	family
Hexamastix	235493	genus
Honigbergiellidae	723924	family
Ditrichomonas	39048	genus
Honigbergiella	496875	genus
- Honigbergiellidae sp. JAVA1	723908	species
Monotrichomonas	85695	genus
Tetratrichomastix	2885703	genus
Tricercomitidae	741009	family
Tricercomitus	741010	genus
unclassified Honigbergiellida	2020167	no rank
- Honigbergiellida sp.	2020168	species
- Honigbergiellida sp. ICepicka-2021a	2885707	species
- Honigbergiellida sp. ICepicka-2021b	2885708	species
- Honigbergiellida sp. ICepicka-2021c	2885709	species
Hypotrichomonadida	740984	order
Hypotrichomonadidae	740985	family
Hypotrichomonas	5734	genus
Trichomitus	5731	genus
Lophomonadida	2662610	order
Daimonympha	3119955	genus
- Daimonympha friedkini	3043608	species
Lophomonas	740978	genus
- Lophomonas blattarum	1212452	species
- Lophomonas striata	1077219	species
unclassified Lophomonas	2619175	no rank
Parabasalia incertae sedis	1312499	no rank
Pimpavicka	3045689	genus
- Pimpavicka limacoides	2885711	species
Spirotrichonymphida	285693	order
Holomastigotoididae	104084	family
Brugerollina	3031351	genus
Cononympha	2059669	genus
Cuppa	2817279	genus
Fraterculus	2820021	genus
Holomastigotes	2486643	genus
Holomastigotoides	104085	genus
Nanospironympha	3031352	genus
Pseudospironympha	3031353	genus
Spironympha	2971523	genus
Spirotrichonympha	104088	genus
Spirotrichonymphella	285702	genus
Uteronympha	3086165	genus
Microjoenia	2864023	genus
- Microjoenia amphorae	3075715	species
- Microjoenia tonsurae	3075716	species
unclassified Microjoenia	2864032	no rank
unclassified Spirotrichonymphida	2694799	no rank
- Spirotrichonymphida sp.	1985904	species
Trichomonadida	37104	order	trichomonads
Pseudotrichomonas	39064	genus
- Pseudotrichomonas keilini	39065	species
unclassified Pseudotrichomonas	2646387	no rank
Trichomonadidae	181550	family
Cochlosoma	227313	genus
Lacusteria	929579	genus
Pentatrichomonas	5727	genus
Pentatrichomonoides	41453	genus
Pseudotrypanosoma	77083	genus
Tetratrichomonas	5729	genus
Trichomitopsis	199294	genus
Trichomonas	5721	genus
environmental samples	318247	no rank
- uncultured Pentatrichomonas	1819329	species
- uncultured Tetratrichomonas	1204563	species
- uncultured trichomonad	315790	species
unclassified Trichomonadida	507489	no rank
- Hypotrichomonadidae sp. KANEK	723922	species
- Trichomonadida sp.	2974378	species
- Trichomonadida sp. ICepicka-2021a	2885710	species
- Trichomonadida sp. LN-2016a	1812481	species
- Trichomonadida sp. NJ1	242127	species
- Trichomonadida sp. common myna/Tehran/2014	1912316	species
- Trichomonadida sp. hooded crow/Tehran/2014	1912317	species
- Trichomonadida sp. mockingbird/California/2008	507490	species
- unidentified trichomonad 1	39050	species
Trichonymphida	285692	order
Barbulanymphidae	3158801	family
Barbulanympha	544394	genus
Urinympha	544398	genus
Hoplonymphidae	285697	family
Hoplonympha	285698	genus
Retractinymphidae	3059428	family
Retractinympha	3059429	genus
Spirotrichosomidae	741011	family
Heliconympha	2019512	genus
Leptospironympha	703608	genus
Staurojoeninidae	285687	family
Staurojoenina	285688	genus
Teranymphidae	285682	family
Eucomonympha	104092	genus
Pseudotrichonympha	104082	genus
Teranympha	285685	genus
environmental samples	2528048	no rank
unclassified Teranymphidae	2020131	no rank
Trichonymphidae	67477	family
Trichonympha	63627	genus
unclassified Trichonymphidae	1312419	no rank
unclassified Trichonymphida	1968263	no rank
- Trichonymphida sp.	1968264	species
Tritrichomonadida	740972	order
Dientamoebidae	740973	family
Dientamoeba	43351	genus
Histomonas	135587	genus
Parahistomonas	525768	genus
unclassified Dientamoebidae	1343855	no rank
Monocercomonadidae	135585	family
Monocercomonas	5736	genus
Simplicimonadidae	723907	family
Simplicimonas	723909	genus
Tritrichomonadidae	740983	family
Tritrichomonas	5723	genus
environmental samples	322068	no rank
- uncultured Holomastigotoididae	1905318	species
- uncultured Parabasalia sp.	285696	species
- uncultured Trichonymphida	1905317	species
- uncultured hypermastigid eukaryote	285695	species
unclassified Parabasalia	104029	no rank
- Calcaritermes nearcticus parabasalian symbiont ERJ-2013	1312494	species
- Coptotermes lacteus symbiont WH2002	204268	species
- Cryptotermes brevis symbiont 77086	77086	species
- Cryptotermes brevis symbiont 77087	77087	species
- Cryptotermes brevis symbiont 77088	77088	species
- Cryptotermes brevis symbiont 77089	77089	species
- Cryptotermes cylindroceps parabasalian symbiont ERJ-2013	1312495	species
- Cryptotermes domesticus parabasalian symbiont clone Cd16	104040	species
- Cryptotermes domesticus parabasalian symbiont clone Cd3	104038	species
- Cryptotermes domesticus parabasalian symbiont clone Cd5	104039	species
- Cryptotermes dudleyi symbiont 77085	77085	species
- Cryptotermes havilandi parabasalian symbiont clone ChGh03	641615	species
- Cryptotermes havilandi parabasalian symbiont clone ChGh09	641616	species
- Glyptotermes fuscus parabasalian symbiont clone Gf10	104045	species
- Glyptotermes fuscus parabasalian symbiont clone Gf8	104044	species
- Heterotermes tenuis parabasalian symbiont ERJ-2013	1312496	species
- Hindgut symbiont of Neotermes jouteli	53243	species
- Hodotermopsis sjoestedti parabasalian symbiont clone Hs4	104052	species
- Hodotermopsis sjoestedti parabasalian symbiont clone HsL8	104053	species
- Hodotermopsis sjoestedti parabasalian symbiont clone HsS1	104054	species
- Hodotermopsis sjoestedti parabasalian symbiont clone HsS13	104058	species
- Hodotermopsis sjoestedti parabasalian symbiont clone HsS2	104055	species
- Hodotermopsis sjoestedti parabasalian symbiont clone HsS22	104059	species
- Hodotermopsis sjoestedti parabasalian symbiont clone HsS6	104056	species
- Hodotermopsis sjoestedti parabasalian symbiont clone HsS9	104057	species
- Hypermastigia	285691	class
- Incisitermes immigrans parabasalian symbiont clone Ii	104043	species
- Incisitermes immigrans parabasalian symbiont clone Ii1	104042	species
- Incisitermes marginipennis parabasalian symbiont clone GhImp44	530040	species
- Kalotermes flavicollis gut symbiont clone Kf1	112627	species
- Kalotermes flavicollis gut symbiont clone Kf5	112628	species
- Kalotermes flavicollis gut symbiont clone Kf6	112629	species
- Mastotermes darwiniensis hindgut symbiont sp.	201404	species
- Neotermes castaneus parabasalian symbiont clone NcGh07	641620	species
- Neotermes castaneus symbiont GHG-2010a	906905	species
- Neotermes jouteli parabasalian symbiont clone NjGh14	641621	species
- Neotermes koshunensis parabasalian symbiont clone Nk2	104046	species
- Neotermes koshunensis parabasalian symbiont clone Nk3	104047	species
- Neotermes koshunensis parabasalian symbiont clone Nk4	104048	species
- Neotermes koshunensis parabasalian symbiont clone Nk5	104049	species
- Neotermes koshunensis parabasalian symbiont clone Nk9	104050	species
- Parabasalia sp.	2795410	species
- Parabasalian symbiont from Zootermopsis angusticollis	358757	species
- Porotermes symbiont 77090	77090	species
- Porotermes symbiont 77091	77091	species
- Reticulitermes chinensis parabasalian symbiont	907244	species
- Reticulitermes flavipes gut symbiont cell-2	332194	species
- Reticulitermes flavipes gut symbiont cell-3	332195	species
- Reticulitermes flavipes gut symbiont cell-4	332196	species
- Reticulitermes speratus hindgut protist 130484	130484	species
- Reticulitermes speratus parabasalian symbiont clone Rs16	104032	species
- Reticulitermes speratus parabasalian symbiont clone Rs6	104030	species
- Reticulitermes speratus parabasalian symbiont clone Rs7	104031	species
- Reticulitermes yaeyamanus parabasalian symbiont clone Ry1	104034	species
- Reticulitermes yaeyamanus parabasalian symbiont clone Ry16	104036	species
- Reticulitermes yaeyamanus parabasalian symbiont clone Ry2	104035	species
- Reticulitermes yaeyamanus parabasalian symbiont clone Ry22	104037	species
- Zootermopsis parabasalian symbiont 11	257650	species
- Zootermopsis parabasalian symbiont 13	257651	species
- Zootermopsis parabasalian symbiont 17	257652	species
- Zootermopsis parabasalian symbiont 19	257653	species
- Zootermopsis parabasalian symbiont 22	257654	species
- Zootermopsis parabasalian symbiont 29	257655	species
- Zootermopsis parabasalian symbiont 30	257656	species
- Zootermopsis parabasalian symbiont 31	257657	species
- Zootermopsis parabasalian symbiont 33	257658	species
Preaxostyla	2662611	phylum
Oxymonadida	66288	order	oxymonads
Blattamonas	2304349	genus
- Blattamonas junai	2049345	species
- Blattamonas nauphoetae	2049346	species
- Blattamonas varadinovae	2049348	species
unclassified Blattamonas	2648821	no rank
Opisthomitus	1505651	genus
- Opisthomitus longiflagellatus	1486477	species
unclassified Opisthomitus	2580126	no rank
Oxymonadidae	97343	family
Oxymonas	185581	genus
environmental samples	321837	no rank
Polymastigidae	302780	family
Monocercomonoides	302781	genus
unclassified Polymastigidae	2202100	no rank
Pyrsonymphidae	97340	family
Dasinympha	3398688	genus
Dexiohelix	3398686	genus
Dinenympha	66289	genus
Ileonympha	3398670	genus
Laeohelix	3398685	genus
Ophionympha	3398669	genus
Pyrsonympha	97341	genus
environmental samples	321838	no rank
unclassified Pyrsonymphidae	3109248	no rank
Saccinobaculidae	388026	family
Saccinobaculus	388027	genus
Streblomastigidae	222438	family
Streblomastix	222439	genus
environmental samples	413578	no rank
- uncultured Oxymonadida sp.	413579	species
unclassified Oxymonadida	356863	no rank
- Incisitermes marginipennis oxymonad symbiont clone GhImp29	530041	species
- Oxymonadida sp.	3238010	species
- Oxymonadida sp. PoOxA	2202099	species
- Oxymonadida sp. PoOxC	2483474	species
- Oxymonadida sp. PqOnA1	2580132	species
- Oxymonadida sp. PqOnA2	2580133	species
- Oxymonadida sp. PqOnB	2580134	species
- Oxymonadida sp. PqOnC	2580135	species
- Oxymonadida sp. SCT-2017d	2049347	species
- Symbiotic protist of Reticulitermes speratus	356864	species
- unidentified Oxymonadida A-14	66291	species
Paratrimastigidae	2662613	family
Paratrimastix	1709327	genus
- Paratrimastix eleionoma	1709329	species
- Paratrimastix pyriformis	342808	species
- Paratrimastix pyriformis ATCC50562	137420	species
- Paratrimastix pyriformis ATCC50598	137421	species
unclassified Paratrimastix	3238001	no rank
unclassified Paratrimastigidae	3061864	no rank
- Paratrimastigidae sp.	3061865	species
Trimastigidae	2662612	family
Trimastix	137418	genus
- Trimastix marina	137419	species
environmental samples	1275957	no rank
unclassified Trimastix	2646010	no rank
unclassified Metamonada	2650046	no rank
- Metamonada sp.	2611345	species
- Metamonada sp. 30W	2650085	species
- Metamonada sp. 35W	2650086	species
- Metamonada sp. 36W	2650087	species
- Metamonada sp. 37W	2650088	species
- Metamonada sp. 39W	2650089	species
- Metamonada sp. 41W	2650090	species
- Metamonada sp. 42W	2650091	species
- Metamonada sp. 43W	2650092	species
- Metamonada sp. GGile-2023aa	3109265	species
- Metamonada sp. GGile-2023g	3075732	species
- Metamonada sp. GGile-2023h	3075733	species
- Metamonada sp. GGile-2023i	3075734	species
- Metamonada sp. GGile-2023j	3075735	species
- Metamonada sp. GGile-2023k	3075736	species
- Metamonada sp. GGile-2023l	3075737	species
- Metamonada sp. GGile-2023q	3075742	species
- Metamonada sp. GGile-2023u	3075748	species
- Metamonada sp. GGile-2023v	3109260	species
- Metamonada sp. GGile-2023w	3109261	species
- Metamonada sp. GGile-2023z	3109264	species
- Metamonada sp. N8	2650093	species
- Metamonada sp. P7	2650094	species
- Preaxostyla sp.	2797837	species