home > sra-sample > ERS514165
identifier ERS514165
type sra-sample
sameAs
biosample  SAMEA2673230
organism uncultured bacterium
attributes
ENA first public  2014-09-27
ENA last update  2016-10-21
External Id  SAMEA2673230
INSDC center alias  VTT
INSDC center name  VTT Technical Research Centre of Finland
INSDC first public  2014-09-27T17:04:03Z
INSDC last update  2016-10-21T09:43:57Z
INSDC status  public
Submitter Id  OL-KR49B
adapters  CGTATCGCCTCCCTCGCGCCATCAG, CTATGCGCCTTGCCAGCCCGCTCAG
alkalinity  0.16
calcium  2700
chloride  9940
collection date  2009-12-14
conductivity  2670
environment (biome)  aquifer
environment (feature)  saline groundwater
environment (material)  water
geographic location (country and/or sea)  Finland
geographic location (depth)  415
geographic location (latitude)  61.23694444
geographic location (longitude)  21.44083333
geographic location (region and locality)  Olkiluoto
investigation type  metagenome
magnesium  8.0E-4
multiplex identifiers  ACACTG
nucleic acid extraction  MoBio Power water RNA extraction kit
organism count  15000 / ml
oxygenation status of sample  anaerobic
pcr primers  AGAGTTTGATCCTGGCTCAG
ph  8.1
project name  DeepOlki
sample collection device or method  pumping
sample material processing  concentration by filtration
sample name  OL-KR49B
sample volume or weight for DNA extraction  1000
sequencing method  454 Titanium
source material identifiers  groundwater
water environmental package  water
properties 
{...}
dbXrefs
bioproject  PRJEB6874
sra-run  ERR571293
sra-submission  ERA337217
biosample  SAMEA2673230
sra-study  ERP006516
sra-experiment  ERX530282
distribution JSONJSON-LD
Download
ERA337217.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2014-09-28T11:00:33Z
dateModified 2021-09-10T16:16:47Z
datePublished 2014-09-28T11:00:33Z